PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000924.1_g00007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 623aa    MW: 68964 Da    PI: 9.4759
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000924.1_g00007.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023224246223
                              EETTTTEEESSHHHHHHHHHH.T CS
                  zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                              +Cp Cg+ F  ++nL+ H ++ H
  Itr_sc000924.1_g00007.1 224 SCPVCGEIFMKPENLELHHSVrH 246
                              6*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280225246IPR007087Zinc finger, C2H2
SuperFamilySSF563991.34E-22248452No hitNo description
Gene3DG3DSA:3.90.228.107.1E-15249450IPR012317Poly(ADP-ribose) polymerase, catalytic domain
CDDcd092721.84E-42486588No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    Send to blast
MAKTKTKTSQ KHPKEKKLKT PKPQNHCEGK EVQKPHSWAV VRSLFTCKHL QAQIEQQQQQ  60
KQEEQQVQAE QPKVQSEKHN VQSKNSKLEP PPHHHLQQPI EESSKKCKKL KCSGSICSNT  120
KVMHRPELSS SSSPEEHKRK SPFSSCKNLN GSTRSMKVTL NDLNNINSAT ATANISAPTS  180
SPSIVGSFRA MPFRKLSGCY ECRMVVDPVL GMTRDPSLRT TISSCPVCGE IFMKPENLEL  240
HHSVRHAVSE LGPEDTSRNI VEIIFQSSWL KKDTPICKID RILKVHNTPR TISRFEEYRE  300
ATKAKANKQS KKHPRCIADG NELLRFHCTT FACSLGLNAS SNLCNSIPNC HVCGIIKNGF  360
KAAEDVGGGA GKGILTTATS GRAHDSARVV SSGDDNKRAM LVCRVIAGRV KKNMEGGLEE  420
YDSVAGAAGV YSNLDELYVF NHRAILPCFV TQKLKEATDS LLPALRQGGL TTVSFLVQPL  480
SLGNQRSKTV SRSSLEAEYQ ALAYAVCETQ WIAFLLKDLY AYMQQPATVF CDNKSAVAIA  540
ENHVFHERTK HIEIDCHLVL EKVSNGLVKL LSVFSLNQIA DGFTKPLPIT LFTNFISKLG  600
IQDLRHLMGV LENKAGRSNE GNS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002284394.30.0PREDICTED: uncharacterized protein LOC100257501
TrEMBLA0A068UVV80.0A0A068UVV8_COFCA; Uncharacterized protein
STRINGVIT_18s0001g03670.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107231517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.14e-98C2H2-like zinc finger protein